* CPV: sci-chemistry/eden-5.3 * REPO: gentoo * Maintainer: sci-chemistry@gentoo.org * USE: elibc_glibc kernel_linux test userland_GNU x86 >>> Unpacking source... >>> Unpacking eden_V5.3.tar.gz to /var/tmp/portage/sci-chemistry/eden-5.3/work * Applying makefile-fixes.patch ... [ ok ] >>> Source unpacked in /var/tmp/portage/sci-chemistry/eden-5.3/work >>> Compiling source in /var/tmp/portage/sci-chemistry/eden-5.3/work/eden ... make -j14 CC=i686-pc-linux-gnu-gcc i686-pc-linux-gnu-gcc -O2 -pipe -c eden.c i686-pc-linux-gnu-gcc -O2 -pipe -c addmaps.c i686-pc-linux-gnu-gcc -O2 -pipe -c apodfc.c i686-pc-linux-gnu-gcc -O2 -pipe -c apodfo.c i686-pc-linux-gnu-gcc -O2 -pipe -c back.c i686-pc-linux-gnu-gcc -O2 -pipe -c cadhkl.c i686-pc-linux-gnu-gcc -O2 -pipe -c convert.c i686-pc-linux-gnu-gcc -O2 -pipe -c count.c i686-pc-linux-gnu-gcc -O2 -pipe -c distance.c i686-pc-linux-gnu-gcc -O2 -pipe -c dphase.c i686-pc-linux-gnu-gcc -O2 -pipe -c expandfc.c i686-pc-linux-gnu-gcc -O2 -pipe -c expandfo.c i686-pc-linux-gnu-gcc -O2 -pipe -c forth.c eden.c: In function ‘main’: eden.c:322:6: warning: format not a string literal and no format arguments i686-pc-linux-gnu-gcc -O2 -pipe -c maketar.c back.c: In function ‘back_main’: back.c:115:4: warning: format not a string literal and no format arguments count.c: In function ‘print_el_count’: count.c:463:6: warning: format not a string literal and no format arguments count.c:468:6: warning: format not a string literal and no format arguments i686-pc-linux-gnu-gcc -O2 -pipe -c perturbhkl.c convert.c: In function ‘readXmap’: convert.c:293:16: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result convert.c:301:14: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result convert.c:305:19: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result convert.c: In function ‘readXmap_header’: convert.c:239:16: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result convert.c:245:16: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result convert.c:258:11: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result convert.c:261:11: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result i686-pc-linux-gnu-gcc -O2 -pipe -c ranphase.c i686-pc-linux-gnu-gcc -O2 -pipe -c refine.c i686-pc-linux-gnu-gcc -O2 -pipe -c regrid.c i686-pc-linux-gnu-gcc -O2 -pipe -c shapes.c i686-pc-linux-gnu-gcc -O2 -pipe -c solve.c i686-pc-linux-gnu-gcc -O2 -pipe -c sym.c i686-pc-linux-gnu-gcc -O2 -pipe -c tohu.c i686-pc-linux-gnu-gcc -O2 -pipe -c variance.c i686-pc-linux-gnu-gcc -O2 -pipe -c apodutil.c i686-pc-linux-gnu-gcc -O2 -pipe -c basics.c refine.c: In function ‘write_pdb’: refine.c:958:9: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result refine.c:960:9: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result refine.c: In function ‘read_xplor’: refine.c:161:8: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result refine.c:162:8: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result refine.c:163:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result refine.c:165:8: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result refine.c:171:8: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result refine.c:205:8: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result refine.c:251:10: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result refine.c:258:9: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result i686-pc-linux-gnu-gcc -O2 -pipe -c calc_rho.c i686-pc-linux-gnu-gcc -O2 -pipe -c ccg.c i686-pc-linux-gnu-gcc -O2 -pipe -c ccgutil.c i686-pc-linux-gnu-gcc -O2 -pipe -c concosts.c apodutil.c: In function ‘scale_fo’: apodutil.c:960:15: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result apodutil.c:963:15: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result apodutil.c: In function ‘show_wilson_plots’: apodutil.c:749:17: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result i686-pc-linux-gnu-gcc -O2 -pipe -c cost.c i686-pc-linux-gnu-gcc -O2 -pipe -c crysutil.c i686-pc-linux-gnu-gcc -O2 -pipe -c fftwshare.c concosts.c: In function ‘prepare_singlets’: concosts.c:455:23: warning: format not a string literal and no format arguments concosts.c: In function ‘prepare_triplets’: concosts.c:559:4: warning: format not a string literal and no format arguments calc_rho.c: In function ‘fill_ff_tables’: calc_rho.c:103:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result calc_rho.c:103:58: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result calc_rho.c:107:10: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result calc_rho.c:113:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result calc_rho.c:122:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result calc_rho.c:132:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result calc_rho.c:135:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result calc_rho.c:138:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result calc_rho.c:139:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result calc_rho.c:140:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result calc_rho.c:142:12: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result i686-pc-linux-gnu-gcc -O2 -pipe -c highres.c i686-pc-linux-gnu-gcc -O2 -pipe -c hklinit.c i686-pc-linux-gnu-gcc -O2 -pipe -c hklread.c i686-pc-linux-gnu-gcc -O2 -pipe -c hklutil.c i686-pc-linux-gnu-gcc -O2 -pipe -c init.c i686-pc-linux-gnu-gcc -O2 -pipe -c pdbutil.c i686-pc-linux-gnu-gcc -O2 -pipe -c qshare.c i686-pc-linux-gnu-gcc -O2 -pipe -c regutil.c pdbutil.c: In function ‘writePdbInfo’: pdbutil.c:497:12: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result pdbutil.c:499:17: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result pdbutil.c:501:17: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result i686-pc-linux-gnu-gcc -O2 -pipe -c remap.c i686-pc-linux-gnu-gcc -O2 -pipe -c ssetup.c i686-pc-linux-gnu-gcc -O2 -pipe -c util.c i686-pc-linux-gnu-gcc -o fbyteswap fbyteswap.c util.c: In function ‘prompt’: util.c:269:5: warning: format not a string literal and no format arguments util.c: In function ‘start_record’: util.c:725:6: warning: format not a string literal and no format arguments util.c: In function ‘filelength’: util.c:360:12: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result util.c:362:17: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result util.c:364:17: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result util.c: In function ‘help’: util.c:236:20: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result i686-pc-linux-gnu-gcc eden.o addmaps.o apodfc.o apodfo.o back.o cadhkl.o convert.o count.o distance.o dphase.o expandfc.o expandfo.o forth.o maketar.o perturbhkl.o ranphase.o refine.o regrid.o shapes.o solve.o sym.o tohu.o variance.o apodutil.o basics.o calc_rho.o ccg.o ccgutil.o concosts.o cost.o crysutil.o fftwshare.o highres.o hklinit.o hklread.o hklutil.o init.o pdbutil.o qshare.o regutil.o remap.o ssetup.o util.o -L/usr/lib -lsfftw -lm -g -lgsl -lgslcblas -o eden >>> Source compiled. >>> Test phase [none]: sci-chemistry/eden-5.3 >>> Install eden-5.3 into /var/tmp/portage/sci-chemistry/eden-5.3/image/ category sci-chemistry * Tinderbox QA Notice: 'make' called by src_install make -j14 install mv fbyteswap /var/tmp/portage/sci-chemistry/eden-5.3/image/usr/bin mv eden /var/tmp/portage/sci-chemistry/eden-5.3/image/usr/bin/seden chmod 751 /var/tmp/portage/sci-chemistry/eden-5.3/image/usr/bin/seden >>> Completed installing eden-5.3 into /var/tmp/portage/sci-chemistry/eden-5.3/image/ strip: i686-pc-linux-gnu-strip --strip-unneeded -R .comment usr/bin/seden usr/bin/fbyteswap * QA Notice: Files built without respecting LDFLAGS have been detected * Please include the following list of files in your report: * /usr/bin/seden * /usr/bin/fbyteswap